This manual is supplied with the iBlot™ 2 Gel Transfer Device (Cat. no. IB21001). The contents of the iBlot™ 2 Gel Transfer Device are listed below. See “iBlot™ 2 Gel Transfer Device specifications“ on page 55 for specifications and description of the iBlot™ 2 Gel Transfer Device. Component Quantity iBlot™ 2 Gel Transfer Device 1
conditions described in this manual. Operation of the iBlot™ 2 Gel Transfer Device is subject to the following conditions: • Indoor use.
iBlotTM 2 Dry Blotting System USER GUIDE For dry, electroblotting of proteins from mini-, midi-, and EPAGETM gels Catalog Number IB21001 Publication Number MAN0009112 Revision E.0 For Research Use Only. Not for use in diagnostic procedures. Life Technologies Corporation | 5781 Van Allen Way | Carlsbad, CA 92008 For descriptions of symbols on product labels or product documents, go to thermofisher.com/symbols-definition. The information in this guide is subject to change without notice. DISCLAIMER: TO THE EXTENT ALLOWED BY LAW, THERMO FISHER SCIENTIFIC INC. AND/OR ITS AFFILIATE(S) WILL NOT BE LIABLE FOR SPECIAL, INCIDENTAL, INDIRECT, PUNITIVE, MULTIPLE, OR CONSEQUENTIAL DAMAGES IN CONNECTION WITH OR ARISING FROM THIS DOCUMENT, INCLUDING YOUR USE OF IT. Revision history: Pub. No. MAN0009112 Revision E.0 D.0 Date 10 January 2019 15 March 2017 Description Replacing pictures in the "Replacing electrical contacts" section. Converted to CCMS. Addition of detailed information on proper method of closing device lid. Important Licensing Information: These products may be covered by one or more Limited Use Label Licenses. By use of these products, you accept the terms and conditions of all applicable Limited Use Label Licenses. NOTICE TO PURCHASER: DISCLAIMER OF LICENSE: Purchase of this software product alone does not imply any license under any process, instrument or other apparatus, system, composition, reagent or kit rights under patent claims owned or otherwise controlled by Life Technologies Corporation, either expressly, or by estoppel. TRADEMARKS: All trademarks are the property of Thermo Fisher Scientific and its subsidiaries unless otherwise specified. ©2019 Thermo Fisher Scientific Inc. All rights reserved. Contents CHAPTER 1 Product information . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6 Product contents . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6 Types of products . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6 iBlotTM 2 Gel Transfer Device contents . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6 Before starting . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6 Installing the instrument . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7 Service operation requirements . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8 Unpacking instructions . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8 Upon receiving the instrument . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8 Unpacking the iBlotTM 2 Gel Transfer Device . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8 iBlotTM 2 Gel Transfer Device . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8 Front view . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8 Rear view . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9 Side view . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9 About the system . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9 iBlotTM 2 Dry Blotting System . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9 Features . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 10 System components . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 10 System overview . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 10 Description of parts . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12 iBlotTM 2 Gel Transfer Device . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12 Blotting roller . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 13 Stylus . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 14 Power cord . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 14 Power adapters . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 14 iBlotTM 2 Transfer Stacks . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 15 Guidelines for iBlotTM 2 Transfer Stacks . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 15 Top stack . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 16 Bottom stack . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 16 Transfer membrane . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 16 iBlotTM Filter Paper . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 17 iBlotTM 2 absorbent pad . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 17 Operating the iBlotTM 2 Gel Transfer Device . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 18 First time usage of the iBlotTM 2 Gel Transfer Device . . . . . . . . . . . . . . . . . . . . . . . . . . . . 18 Control panel of the iBlotTM 2 Gel Transfer Device . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 18 iBlotTM 2 Gel Transfer Device options screen . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 19 iBlotTM 2 Dry Blotting System User Guide 3 Contents Setting date and time . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 20 iBlotTM 2 Gel Transfer Device tutorial . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 20 Writing logs to a USB storage device . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 21 iBlotTM 2 Gel Transfer Device application notes . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 21 Upgrading iBlotTM 2 Gel Transfer Device firmware . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 22 Resetting the iBlotTM 2 Gel Transfer Device to factory settings . . . . . . . . . . . . . . . . . . . . 22 Description of methods . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 23 Methods . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 23 Recommended running parameters . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 23 CHAPTER 2 Protein transfer protocol . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 25 Experimental overview . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 25 Experimental outline . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 25 General guidelines . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 25 Recommended gel types . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 26 Using the iBlotTM 2 Gel Transfer Device . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 26 Introduction . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 26 Materials needed . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 26 Selecting a method . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 27 Removing the gel . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 28 General guidelines . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 28 Assembling the iBlotTM 2 Transfer Stack . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 29 Performing blotting . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 33 Disassembling the iBlotTM 2 Transfer Stack . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 34 Introduction . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 34 Procedure . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 34 CHAPTER 3 Custom methods . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 36 Creating custom methods . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 36 Introduction . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 36 Programming a custom method . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 36 Save a custom method . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 38 Creating custom methods from a template . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 39 Introduction . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 39 Select a template . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 39 Change voltage/time . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 40 Add/remove steps . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 41 Save a custom method . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 43 APPENDIX A Troubleshooting . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 45 Introduction . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 45 4 iBlotTM 2 Dry Blotting System User Guide Contents APPENDIX B Post transfer analysis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 48 Post transfer analysis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 48 APPENDIX C Optimizing blotting . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 49 Optimizing blotting . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 49 APPENDIX D Maintenance . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 50 Cleaning . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 50 General maintenance . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 50 Replacing the fuse . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 50 Replacing electrical contacts . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 51 APPENDIX E Product specifications . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 55 iBlotTM 2 Gel Transfer Device specifications . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 55 iBlotTM 2 Transfer Stack specifications . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 55 APPENDIX F Accessory products . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 57 iBlotTM 2 Transfer Stacks . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 57 Additional products . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 57 Precast gels and premade buffers . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 58 APPENDIX G Safety . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 59 Instrument safety . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 59 General . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 59 Physical injury . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 59 Electrical safety . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 60 Cleaning and decontamination . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 61 Instrument component and accessory disposal . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 61 Safety and electromagnetic compatibility (EMC) standards . . . . . . . . . . . . . . . . . . . . . . . . . . 61 Symbols on instrument . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 62 Safety standards . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 62 EMC . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 62 Environmental design standards . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 63 Chemical safety . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 64 Biological hazard safety . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 65 APPENDIX H Documentation and support . . . . . . . . . . . . . . . . . . . . . . . . . . . . 66 Customer and technical support . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 66 Limited product warranty . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 66 iBlotTM 2 Dry Blotting System User Guide 5 1 Product information Product contents Types of products iBlotTM 2 Gel Transfer Device contents This manual is supplied with the iBlotTM 2 Gel Transfer Device (Cat. no. IB21001). The contents of the iBlotTM 2 Gel Transfer Device are listed below. See "iBlotTM 2 Gel Transfer Device specifications" on page 55 for specifications and description of the iBlotTM 2 Gel Transfer Device. Component iBlotTM 2 Gel Transfer Device Blotting Roller Stylus Power Cord Power Adapters (North America/Japan, Europe, UK) Quantity 1 1 1 1 1 set Before starting Before you begin using this product, or any installation or service operation, please read the following safety information. Attention to these warnings will help prevent personal injuries and damage to the products. It is your responsibility to use the product in an appropriate manner. This product is designed for use solely in laboratory environments, and must not be used in any way that may cause personal injury or property damage. You are responsible if the product is used for any intention other than its designated purpose or in disregard of Thermo Fisher Scientific instructions. Thermo Fisher Scientific shall assume no responsibility for such use of the product. The product is used for its designated purpose if it is used in accordance with its product documentation and within its performance limits. Using the product requires technical skills and a basic knowledge of English. It is therefore essential that only skilled and specialized staff or thoroughly trained personnel with the required skills be allowed to use the product. Keep the basic safety instructions and the product documentation in a safe place and pass them on to the subsequent users. Applicable local or national safety regulations and rules for the prevention of accidents must be observed in all work performed. 6 iBlotTM 2 Dry Blotting System User Guide Installing the instrument 1 Chapter 1 Product information Product contents The iBlotTM 2 Gel Transfer Device complies with the TUV Rhineland North America Inc. safety requirements, part 15 of the FCC rules, and the European Community Safety requirements. Operation of the iBlotTM 2 Gel Transfer Device is subject to the conditions described in this manual. Operation of the iBlotTM 2 Gel Transfer Device is subject to the following conditions: · Indoor use · Altitude below 2,000 meters · Temperature range: 5 to 40°C · Maximum relative humidity: 80% (maximum relative humidity 80% for temperatures up to 31°C, decreasing linearly to 50% relative humidity at 40°C) · Installation categories (over voltage categories) II; Pollution degree 2 · Mains supply voltage fluctuations not to exceed 10% of the nominal voltage (100 240 V, 50/60 Hz, 6.3 A) · Mains plug is a disconnect device and must be easily accessible. · Do not attempt to open the iBlotTM 2 Gel Transfer Device. To honor the warranty,iBlotTM 2 Gel Transfer Device can only be opened and serviced by Thermo Fisher Scientific. · The protection provided by the equipment may be impaired if the equipment is used in a manner not specified by Thermo Fisher Scientific. · The device must be connected to a mains socket outlet with protective earthing connections. · Ventilation requirements: Room ventilation · Do not use if device becomes cracked or broken in any area. The product may be installed only under the conditions and in the positions specified by Thermo Fisher Scientific. Following are the required operating position and conditions: · Do not place the product in an area where it will be subject to vibration. · Do not place the product on surfaces, vehicles, cabinets or tables that for reasons of weight or stability are unsuitable for this purpose. · Do not place the product on heat-generating surface or near heat emitting devices such equipment racks or heaters. Verify that there is sufficient clearance between the product and any other system that may exhaust warm air. · The product's ventilation should not be obstructed. If proper ventilation is not provided it can result in electric shock, fire and/or serious personal injury or death. · The product is for indoor use only. · Use only with suitably rated mains supply cord (having 3 conductors, min. 16 AWG or 1.5 mm2, min. 300V, Harmonized Type for Europe and UL Listed/CSA Certified for North America, with molded plug rated min. 10A). · A tolerance of ±10% shall apply to the nominal input voltage and ±3% to the nominal frequency, over voltage category 2. · Maximum operating altitude 2,000 m asl. Maximum transport altitude 4,500 m asl. iBlotTM 2 Dry Blotting System User Guide 7 1 Chapter 1 Product information Unpacking instructions Service operation requirements In the event of an equipment malfunction, it is the responsibility of the customer to report the need for service to Thermo Fisher Scientific or to one of the authorized agents. For service information, contact Technical Support. Servicing of this device is to be performed by trained service personnel only. Unpacking instructions Upon receiving the Examine the unit carefully for any damage incurred during transit. File any damage instrument claims with the carrier. The warranty does not cover in-transit damage. Unpacking the iBlotTM 2 Gel Transfer Device · Remove the roller and stylus from the Styrofoam packaging. · Remove the device from the Styrofoam packaging. · Remove the protective film from the touch screen. iBlotTM 2 Gel Transfer Device Front view The front-top view showing various parts of the iBlotTM 2 Gel Transfer Device is shown below. 8 iBlotTM 2 Dry Blotting System User Guide Rear view 1 Chapter 1 Product information About the system A rear view showing various parts of the iBlotTM 2 Gel Transfer Device is shown below. Side view A side view showing various parts of the iBlotTM 2 Gel Transfer Device is shown below. About the system iBlotTM 2 Dry Blotting System The iBlotTM 2 Dry Blotting System consists of the iBlotTM 2 Gel Transfer Device and associated iBlotTM 2 Transfer Stacks (sold separately). The iBlotTM 2 Gel Transfer Device has a unique design, which, in conjunction with the patented gel matrix technology of the iBlotTM 2 Transfer Stacks, results in a shortened distance between electrodes, high field strength, and high currents to reduce transfer times when blotting proteins onto membranes. Western blotting of proteins from midi- or mini-sized polyacrylamide gels onto nitrocellulose or PVDF membranes within 7 minutes can be performed with iBlotTM 2 Transfer Stacks. See the next page to understand how the iBlotTM 2 Dry Blotting System works and "Description of parts" on page 12 for details on various parts of the system. iBlotTM 2 Dry Blotting System User Guide 9 1 Chapter 1 Product information About the system Features System components System overview · Pre-programmed (iBlotTM 2 Gel Transfer Device) with six Methods for transfer of proteins from various gel types in 78 minutes · Built-in safety features in the device enhance user safety · User-friendly iBlotTM 2 Gel Transfer Device design with an integrated power supply to avoid inconsistencies associated with the use of an external power supply · Fast, reliable protein transfer using iBlotTM 2 Transfer Stacks with integrated nitrocellulose or PVDF transfer membranes for blotting without the need to prepare buffers · Compatible for use with BoltTM Bis-Tris PLUSTM, NuPAGETM Bis-Tris and TrisAcetate, Tris-Glycine, Tricine (in mini- and midi gel formats), and E-PAGETM gels iBlotTM 2 Gel Transfer Device The iBlotTM 2 Gel Transfer Device is a self-contained blotting unit with integrated power supply used for fast, dry blotting of proteins. See "iBlotTM 2 Gel Transfer Device" on page 12 for details. iBlotTM 2 Transfer Stacks The iBlotTM 2 Transfer Stacks are disposable stacks that have integrated PVDF or nitrocellulose transfer membranes to perform dry blotting of proteins. Each iBlotTM 2 Transfer Stack contains a copper electrode and appropriate cathode and anode buffers in the gel matrix to allow fast, reliable transfer of proteins. See "iBlotTM 2 Transfer Stacks" on page 15 for details. The iBlotTM 2 Dry Blotting System is based on the dry blotting concept, utilizing the unique, patented gel matrix technology developed for E-GelTM and E-PAGETM gels for the iBlotTM 2 Transfer Stacks. The iBlotTM 2 Transfer Stack consists of a Bottom Stack and a Top Stack sandwiching a pre-run gel and a nitrocellulose (0.2 µm) or PVDF (0.2 µm) membrane. The iBlotTM 2 Transfer Stack is assembled with the blotting membrane on the anode side, and a prerun gel on the cathode side. 10 iBlotTM 2 Dry Blotting System User Guide 1 Chapter 1 Product information About the system Schematic of iBlotTM 2 Transfer Stack showing the flow of current After the stack is assembled on the iBlotTM 2 Gel Transfer Device, and the appropriate Method is selected, the run is initiated. Complete transfer of proteins from the gel to the blotting membrane is accomplished in approximately 78 minutes. The rapid transfer without the need for external power supply or premade buffers is possible due to the following features of the iBlotTM 2 Dry Blotting System: · The gel matrix of the Bottom and Top Stack incorporate the appropriate anode and cathode buffers to act as ion reservoirs. This format eliminates the need for premade buffers or soaked filter paper, and minimizes handling that can lead to inconsistent performance. · The copper anode does not generate oxygen gas as a result of water electrolysis, resulting in increased transfer consistency. Conventional inert electrodes present in other blotting systems result in oxygen generation, which can result in blotting distortion. · The design of the iBlotTM 2 Gel Transfer Device reduces the distance between the electrodes and the integrated power supply. This unique design combined with the gel matrix technology of iBlotTM 2 Transfer Stacks allows the system to generate high field strength and increase the transfer speed. iBlotTM 2 Dry Blotting System User Guide 11 1 Chapter 1 Product information Description of parts Description of parts iBlotTM 2 Gel Transfer Device The iBlotTM 2 Gel Transfer Device is a protein transfer device with an integrated power supply capable of producing currents up to 6.3 amp, and supplying voltage up to 25 V. Four printed circuit boards hold the electronic components required to process the systems logic unit, modify voltage and currents for display, and power the blotting process. A pre-installed firmware controls the parameters such as voltage and time, and allows selection of Methods (see "Description of methods" on page 23 for details on each Method). IMPORTANT! When installing the iBlotTM 2 Gel Transfer Device, make sure it is placed on a level surface. Keep the area around the device clear to ensure proper ventilation of the unit. For your safety: Position the device properly such that the Power switch and the AC inlet located at the rear of the unit ("Rear view" on page 9) are easily accessible. A top view of an open iBlotTM 2 Gel Transfer Device identifying various parts is shown below. See "iBlotTM 2 Gel Transfer Device" on page 8 for side and rear views of the device. 12 iBlotTM 2 Dry Blotting System User Guide 1 Chapter 1 Product information Description of parts Blotting roller Blotting surface The blotting surface is the area where the iBlotTM 2 Transfer Stacks containing the gel are placed to perform blotting. Alignment guides are used for proper orientation of normal and mini transfer stacks. Lid The lid of the iBlotTM 2 Gel Transfer Device contains ventilation holes to allow for proper ventilation of the unit during the run. The pressure plate exerts even pressure on the stack surface when the lid is closed. Control panel The Touch Screen Control Panel is a LCD display allowing the user to select Methods and control the device. See "Control panel of the iBlotTM 2 Gel Transfer Device" on page 18 for control panel details. The Blotting Roller is a plastic roller attached to a stainless steel handle (8.6 cm wide). The Blotting Roller is used to remove any air bubbles between the gel and blotting membrane during the assembly of the stacks and gel. iBlotTM 2 Dry Blotting System User Guide 13 1 Chapter 1 Product information Description of parts Stylus A stylus is provided for use with the touch screen of the iBlotTM 2 Gel Transfer Device. Power cord The Power Cord connects to the iBlotTM 2 Gel Transfer Device on one end, and to a power adapter (for plugging into an AC electrical outlet) on the other. Power adapters IMPORTANT! Be sure that the AC power switch is in the Off position ("Rear view" on page 9) before attaching the power cord. Attach the power cord to the AC inlet of the device first, and then to the electrical outlet. Use only properly grounded AC outlets and power cords. Power Adapters (North America/Japan, Europe, UK) are used to connect the power cord to an AC electrical outlet. Use the appropriate adapter for your geographical region. 14 iBlotTM 2 Dry Blotting System User Guide 1 Chapter 1 Product information Description of parts iBlotTM 2 Transfer Stacks Guidelines for iBlotTM 2 Transfer Stacks The iBlotTM 2 Transfer Stacks are used to transfer proteins from gels onto nitrocellulose or PVDF membranes, and are available in Standard size for blotting E-PAGETM, midi-, or two mini gels, and Mini size for blotting one mini gel. See "iBlotTM 2 Transfer Stack specifications" on page 55 for iBlotTM 2 Transfer Stack specifications. · Store the iBlotTM 2 Transfer Stacks at room temperature. For best results, use the transfer stack before the expiration date printed on the package for each stack. · Do not remove transfer stacks from bottom plastic tray. The plastic tray is a central part of the consumable. It maintains the current within the stacks and separates it from the rest of the device. The plastic tray also contains any liquid to allow easy clean-up. · Discard the iBlotTM 2 Transfer Stack after every use. Do not reuse the iBlotTM 2 Transfer Stack. · Do not use iBlotTM Transfer Stacks in the iBlotTM 2 Gel Transfer Device, or mix components between iBlotTM Transfer Stacks and iBlotTM 2 Transfer Stacks. Use iBlotTM 2 Transfer Stacks only for their designated application. Note: The maximum voltage and current of the output to the gel stacks is 25 VDC and 6.3 Amp. The following iBlotTM 2 Transfer Stacks are available at thermofisher.com/iblot2 (see "iBlotTM 2 Transfer Stacks" on page 57 for ordering information). Product iBlotTM 2 Regular Transfer Stacks iBlotTM 2 Mini Transfer Stacks Transfer Membrane Nitrocellulose PVDF Nitrocellulose PVDF Cat. No. IB23001 IB24001 IB23002 IB24002 Regular or Mini iBlotTM 2 Transfer Stacks come with the following components: Component Mini iBlotTM 2 Transfer Stack 10 iBlotTM 2 Absorbent Pad, -- Regular iBlotTM 2 Absorbent Pad, Mini 10 iBlotTM Filter Paper, Regular -- iBlotTM Filter Paper, Mini 10 Regular 10 10 -- 10 -- iBlotTM 2 Dry Blotting System User Guide 15 1 Chapter 1 Product information Description of parts Top stack The Top Stack is separated from the Bottom Stack by a white plastic separator, and contains a copper electrode and a transfer gel layer. The transfer gel layer acts as an ion reservoir and is composed of an optimized, proprietary gel composition. Bottom stack The Bottom Stack contains a copper electrode, transfer gel layer, and a nitrocellulose (0.2 µm) or PVDF (0.2 µm) membrane for protein transfer. The transfer gel layer acts as an ion reservoir and is composed of an optimized, proprietary gel composition. The transparent plastic tray in which the iBlotTM 2 Transfer Stack is packaged serves as the support for assembling the transfer stacks with the gel. The nitrocellulose (0.2 µm), and PVDF (0.2 µm) membranes do not require any pretreatment before use and minimize protein blow-through during the iBlotTM 2 blotting process. Always use the Bottom Stack with the tray in the iBlotTM 2 Gel Transfer Device. Transfer membrane 16 The iBlotTM 2 Transfer Stacks are assembled with the transfer membrane and are available with: · Nitrocellulose membrane (0.2 µm) The nitrocellulose membrane is composed of 100% pure nitrocellulose to provide high-quality transfer. The membrane is compatible with commonly used detection methods such as staining, immunodetection, fluorescence, or iBlotTM 2 Dry Blotting System User Guide 1 Chapter 1 Product information Description of parts radiolabeling. The proteins bind to the membrane due to hydrophobic and electrostatic interactions. The protein binding capacity is 209 µg/cm2. · PVDF membrane (0.2 µm, low fluorescence) The PVDF membrane has higher binding capacity than nitrocellulose. The PVDF membrane is preactivated and ready for use without any pretreatment with alcohol. The membrane is compatible with commonly used detection methods such as staining, immunodetection, fluorescence, or radiolabeling. The proteins bind to the membrane due to hydrophobic interactions. The protein binding capacity is 240 µg/cm2. iBlotTM Filter Paper The iBlotTM Filter Paper is used for blotting mini- or midi gels. The iBlotTM Filter Paper is placed on top of the pre-run gel before placing the Top Stack to protect the gel integrity during the blotting process. The iBlotTM Filter Paper is supplied in two sizes (see "iBlotTM 2 Transfer Stack specifications" on page 55 for dimensions) for efficient blotting of mini- and midi gels. Do not use the iBlotTM Filter Paper for blotting E-PAGETM gels. Note: Failure to use the iBlotTM Filter Paper during blotting of mini- or midi gels may result in high currents exceeding the current limit leading to a "High Current Error" during the run. iBlotTM 2 absorbent pad The iBlotTM 2 Absorbent Pad absorbs any excess liquid on the stacks formed during blotting and generates even pressure on the stack assembly. It is placed on top of the assembled iBlotTM 2 stack prior to transfer. When properly assembled, the electrical contact of the iBlotTM 2 Absorbent Pad is aligned with the corresponding electrical contacts on the blotting surface of the iBlotTM 2 Gel Transfer Device to allow completion of the electrical circuit. See "iBlotTM 2 Transfer Stack specifications" on page 55 for dimensions of the iBlotTM 2 Absorbent Pad. Discard the iBlotTM 2 Absorbent Pad after every use. Do not reuse the iBlotTM 2 Absorbent Pad. iBlotTM 2 Dry Blotting System User Guide 17 1 Chapter 1 Product information Operating the iBlotTM 2 Gel Transfer Device Operating the iBlotTM 2 Gel Transfer Device First time usage of the iBlotTM 2 Gel Transfer Device The first time the iBlotTM 2 Gel Transfer Device is turned on, you will need to perform the following actions: 1. Configure the clock by touching the appropriate fields and entering the values. Touch Enter when done. Then Touch Done on the Date & Time screen. 2. The Tutorial screen is displayed. Take the tutorial if desired (the tutorial guides the user to assemble a stack and allows you to run the P0 Method if a stack is in the device. Otherwise hit Cancel to go to the Home Screen). 3. OR skip the tutorial to go to the Home Screen. Control panel of the iBlotTM 2 Gel Transfer Device The control panel is a touch screen display allowing: 1. Running the Method that was last used on the device Note: This icon will not appear until after the first time the function is used. 2. Running Preset Templates (Default Methods) 3. Programming Custom Methods Note: For details on creating Methods, refer to "Creating custom methods" on page 36. 4. Running Custom Methods Note: This icon will not appear until after the first time the function is used. 18 iBlotTM 2 Dry Blotting System User Guide 5. Accessing the Options screen 1 Chapter 1 Product information Operating the iBlotTM 2 Gel Transfer Device iBlotTM 2 Gel Transfer Device options screen The Options screen allows the user to perform the following actions: · Set date and time · View a step-by-step tutorial for the iBlotTM 2 Gel Transfer Device · Write logs to a USB device · View application notes · Upgrade firmware · Reset the iBlotTM 2 Gel Transfer Device to factory settings iBlotTM 2 Dry Blotting System User Guide 19 1 Chapter 1 Product information Operating the iBlotTM 2 Gel Transfer Device Setting date and time Touch Date & Time to access the Date & Time screen. 1. Touch the Date or Time field to access a keyboard for entering values. 2. Touch the fields that you want to change, and enter the appropriate value with the keyboard. Touch Enter when done. 3. After entering the Date and Time, touch Done on the Date & Time screen to return to the Options screen. iBlotTM 2 Gel Transfer Device tutorial The Tutorial button provides step-by-step instructions for assembling and running a transfer stack on the iBlotTM 2 Gel Transfer Device. If following the tutorial to assemble a stack in real time, you can perform a run using the default P0 Method at step 10. Touch Cancel to return to the Options screen if you do not wish to perform a run. 20 iBlotTM 2 Dry Blotting System User Guide 1 Chapter 1 Product information Operating the iBlotTM 2 Gel Transfer Device Writing logs to a USB storage device A record of each run is kept by the iBlotTM 2 Gel Transfer Device, with voltage and current being tracked at 1-second intervals. This information can be downloaded to a USB storage device in ".csv" format. 1. Insert a USB storage device into the USB port (Type A) of the iBlotTM 2 Gel Transfer Device. 2. Touch Write Logs to USB Device on the Options screen. Note: If you do not have a USB storage device in place, a prompt to insert a USB storage device will appear. Touch OK to start the transfer after inserting the USB storage device. 3. Do not remove the USB storage device until the Options screen is displayed again. iBlotTM 2 Gel Transfer Device application notes 4. The files are saved to folders titled "iBlotTM2_Logs" and "iBlotTM2_ErrorLogs" on the USB storage device. The App Notes button provides access to application notes for improving transfer under various conditions when using the iBlotTM 2 Gel Transfer Device. iBlotTM 2 Dry Blotting System User Guide 21 1 Chapter 1 Product information Operating the iBlotTM 2 Gel Transfer Device Upgrading iBlotTM 2 Gel Transfer Device firmware The current firmware version on the iBlotTM 2 Gel Transfer Device is displayed on the Firmware Version button. 1. To update firmware, visit thermofisher.com/iblot2, and follow the instructions to download the latest firmware version to a USB storage device. 2. Insert the USB storage device with the new firmware version (".ib2" file) to be installed into the USB port (Type A) of the iBlotTM 2 Gel Transfer Device. 3. Turn on the iBlotTM 2 Gel Transfer Device and go to the Options screen. 4. Touch Firmware Version. Note: If you do not have a USB storage device in place, a prompt to insert a USB storage device will appear. 5. Touch OK to start the update. Do not remove the USB storage device until the Options screen is displayed again, showing the new firmware version. Resetting the iBlotTM 2 Gel Transfer Device to factory settings The Reset to Factory Settings button allows the iBlotTM 2 Gel Transfer Device to be restored to its original factory settings. If this option is selected, all logs and custom methods will be deleted. If you do not wish to reset the iBlotTM 2 Gel Transfer Device, touch the cancel icon to return to the Options screen. 22 iBlotTM 2 Dry Blotting System User Guide 1 Chapter 1 Product information Description of methods Description of methods Methods The iBlotTM 2 Gel Transfer Device is pre-programmed with six voltage Methods that allow blotting using different combinations of volts and time. Method P0 P1 P2 P3 P4 P5 Voltage 20 V for 1 minute 23 V for 4 minutes 25 V for 2 minutes 25 V 23 V 20 V 15 V 10 V Default Run Time 7 minutes 6 minutes 6 minutes 7 minutes 7 minutes 7 minutes Run Time Limit 13 minutes 10 minutes 11 minutes 13 minutes 16 minutes 25 minutes The Default Run Time is the default time setting for a selected Method. The Run Time Limit is the maximum recommended run time for a selected Method. Recommended running parameters The following parameters are recommended for transfer of proteins with molecular weights ranging from 30150 kDa. Transfer Stack Regular transfer stack (1 midi gel or two mini gels) Regular transfer stack (E-PAGETM 48 or 96 gel) Mini transfer stack (one mini gel) Method P0 P3 P0 Volts 2025 20 2025 Run Time 7 minutes 8 minutes 78 minutes The following parameters are recommended for transfer of proteins with molecular weights >150 kDa. iBlotTM 2 Dry Blotting System User Guide 23 1 Chapter 1 Product information Description of methods Transfer Stack Regular transfer stack (1 midi gel or two mini gels) Regular transfer stack (E-PAGETM 48 or 96 gel) Mini transfer stack (one mini gel) Method P0, P3 P0, P3 P0, P3 Volts 2025 Run Time 810 minutes 2025 810 minutes 2025 810 minutes You may need to optimize the blotting parameters (volts or time) based on your initial results (See "Optimizing blotting" on page 49 for details). This may include: · Increasing or decreasing the transfer time. · Performing an ethanol equilibration step prior to transfer can improve overall efficiency of protein transfer. 24 iBlotTM 2 Dry Blotting System User Guide 2 Protein transfer protocol Experimental overview Experimental outline The table below outlines the experimental steps necessary to perform western blotting using the iBlotTM 2 Gel Transfer Device. For more details on each step, see indicated pages. Step 1 2 3 4 5 Action Page Select Method for performing transfer. "Selecting a method" on page 27 Remove the gel from the gel cassette. "Removing the gel" on page 28 Assemble the iBlotTM 2 Transfer Stack with your protein gel for transfer using the iBlotTM 2 Gel Transfer Device. "Assembling the iBlotTM 2 Transfer Stack" on page 29 Perform protein transfer using the selected Method. Disassemble the iBlotTM 2 Transfer Stack. "Performing blotting" on page 33 "Disassembling the iBlotTM 2 Transfer Stack" on page 34 General guidelines To obtain the best results, follow these recommendations: · Wear gloves at all times during the entire blotting procedure to prevent contamination of gels and membranes. · Do not touch the membrane or gel with bare or gloved hands. This may contaminate the gel or membrane and interfere with further analysis. If you need to adjust the membrane, always use forceps. · Avoid using expired iBlotTM 2 Transfer Stacks. Always use the transfer stacks before the specified expiration date printed on the package. · Remove air bubbles as indicated in the protocol using the Blotting Roller supplied with the device. iBlotTM 2 Dry Blotting System User Guide 25 2 Chapter 2 Protein transfer protocol Using the iBlotTM 2 Gel Transfer Device · Do not trim the membrane or iBlotTM 2 Transfer Stacks to fit your gel size. See previous page for gel sizes that are compatible with iBlotTM 2 Gel Transfer Device. Note that iBlotTM 2 Mini Transfer Stacks are available for blotting mini gels ("iBlotTM 2 Transfer Stacks" on page 57). Maintain the membrane size identical to the transfer stacks to avoid direct contact between the top and bottom transfer stacks. · Gently close lid after assembling transfer stacks to ensure metal contacts and transfer stacks do not shift out of position. · Wipe down instrument and contacts after every use. Recommended gel types The gel types compatible for use with iBlotTM 2 Gel Transfer Device and iBlotTM 2 Transfer Stacks are listed below. Gel Type Size Midi gels (NovexTM TrisGlycine PLUSTM, NuPAGETM NovexTM Bis-Tris, TrisAcetate, or Tris-Glycine Midi gels, or equivalent) 13 cm (l) × 8.3 cm (w)1.0 mm thick Mini gels (BoltTM Bis-Tris PLUSTM, NuPAGETMBis-Tris or Tris-Acetate, Tricine, TrisGlycine Gels, or equivalent) 8 cm (l) × 8 cm (w)1.0 or 1.5 mm thick E-PAGETM 48 or 96 Gels 13.5 cm (l) × 10.8 cm (w)3.7 mm thick iBlotTM 2 Transfer Stack iBlotTM 2 Regular Transfer Stack iBlotTM 2 Regular Transfer Stack, or iBlotTM 2 Mini Transfer Stack iBlotTM 2 Regular Transfer Stack Using the iBlotTM 2 Gel Transfer Device Introduction Instructions are provided in this section to assemble the iBlotTM 2 Gel Transfer Device for blotting mini-, midi-, or other gels. Materials needed You will need the following items: · Pre-run mini- or midi gel containing your protein samples and standards · iBlotTM 2 Regular Transfer Stack for blotting one midi gel, two mini gels, or one E-PAGETM gel OR · iBlotTM 2 Mini Transfer Stack for blotting one mini gel · Blotting Roller supplied with the device 26 iBlotTM 2 Dry Blotting System User Guide Selecting a method 2 Chapter 2 Protein transfer protocol Using the iBlotTM 2 Gel Transfer Device Select the appropriate Method for your application on the iBlotTM 2 Gel Transfer Device prior to assembling an iBlotTM 2 Transfer Stack with your gel. 1. Touch the power switch at the rear of the device ("Rear view" on page 9) to turn ON the iBlotTM 2 Gel Transfer Device. The fan in the device begins to run and the digital display turns on. 2. Select the Method by touching: · Templates to access the desired Method (see "Control panel of the iBlotTM 2 Gel Transfer Device" on page 18) · Saved Methods to select a Custom Method (page) · Start Last Run to use the Method from the last run iBlotTM 2 Dry Blotting System User Guide 27 2 Chapter 2 Protein transfer protocol Using the iBlotTM 2 Gel Transfer Device Removing the gel General guidelines Remove the gel from the cassette for transfer after completion of electrophoresis as described below. · Open the mini- or midi gel cassette using the Gel Knife by inserting the knife into the narrow gap between the two plates of the cassette. Push up and down gently on the handle of the knife to separate the plates. Upon opening the cassette, discard the plate without the gel and slowly remove the gel adhered to the other plate. For details on removing the gel, refer to the manual supplied with the minior midi gel. · For other gel types, refer to the manufacturer recommendations to remove the gel from the cassette. · There is generally no need for any pretreatment of the gel after electrophoresis, however, under certain circumstances, an equilibration step can improve results: Equilibration of the gel in 20% ethanol (prepared in deionized water) for 5 10 minutes prior to performing blotting can improve the overall efficiency of transfer for high molecular weight proteins. For NovexTM Tris-Glycine PLUSTM Gels, equilibration in 100 mL of deionized water or transfer buffer for 5 minutes prior to transfer may improve transfer of mid to small molecular weight proteins. This equilibration step can be omitted for optimal transfer of higher molecular weight proteins (>150kDa). · The transfer membrane is supplied in a ready-to-use format in the stacks without any need for pretreatment. Do not treat the PVDF membrane with methanol as the PVDF membrane is preactivated prior to assembly with the transfer stack. · You may blot E-PAGETM gels using the blotting protocol with the Blotting Roller. If you wish to use the Blotting Roller for blotting E-PAGETM gels be sure to: Wash the E-PAGETM gel briefly in deionized water prior to blotting to remove any small gel pieces attached to the gel. Use the Blotting Roller all over the gel including all well areas to flatten any protrusions to ensure even transfer and efficient blotting. · When placing an E-PAGETM gel on the membrane, make sure the open wells face upwards, and that the bottom of the gel is in contact with the membrane. Use the appropriate iBlotTM 2 Transfer Stacks based on the gel that you are blotting. Do not trim the membrane or transfer stacks to fit the size of your gel, as the transfer quality is not affected if the pre-run gel is smaller than the transfer stack. Always maintain the membrane size identical to the transfer stacks to avoid accidental contact between the Bottom and Top Stacks. See "Recommended gel types" on page 26 for gel types compatible with the iBlotTM 2 Gel Transfer Device. · Use the iBlotTM 2 Regular Transfer Stacks for blotting two mini gels or one midi gel · Use the iBlotTM 2 Mini Transfer Stacks for blotting one mini gel. 28 iBlotTM 2 Dry Blotting System User Guide 2 Chapter 2 Protein transfer protocol Using the iBlotTM 2 Gel Transfer Device Assembling the iBlotTM 2 Transfer Stack 1. Open the lid of the device using the latch. Ensure the blotting surface is clean. 2. Unseal the iBlotTM 2 Transfer Stack. iBlotTM 2 Dry Blotting System User Guide 29 2 Chapter 2 Protein transfer protocol Using the iBlotTM 2 Gel Transfer Device 3. Separate the Top Stack and set it to one side of the bench with the transfer gel layer facing up. Keep the Bottom Stack in the transparent plastic tray. Note: In some instances, the membrane may adhere to the separator. Make sure that the membrane is not stuck to the separator before proceeding to the next step. If the membrane is stuck on the separator, use forceps to remove the membrane and place it on top of the Bottom Stack. 4. Place the Bottom Stack with the plastic tray directly on the blotting surface. Align the tray in the center of the blotting surface according to the type of iBlotTM 2 Transfer Stack being used. Do not push trays fully to the top (Mini) or fully to the left (Regular) as this may elevate and twist the tray or interfere with the contacts. The electrical contacts on the tray should be aligned with the corresponding electrical contacts on the blotting surface of the iBlotTM 2 Gel Transfer Device. 5. Ensure there are no bubbles between the membrane and the transfer stack. Remove any trapped air bubbles using the Blotting Roller. 6. Open the gel cassette and immerse the pre-run gel briefly in deionized water (1 10 seconds) to facilitate easy positioning of the gel on top of the transfer membrane. Note: For NovexTM Tris-Glycine PLUSTM gels, rinse in 100 mL of deionized water for 5 minutes to improve transfer of mid to low molecular weight proteins (< 150 kDa). 7. Shake off excess water, and place the pre-run gel on the transfer membrane of the Bottom stack as described: 30 iBlotTM 2 Dry Blotting System User Guide 2 Chapter 2 Protein transfer protocol Using the iBlotTM 2 Gel Transfer Device 8. 1 midi gel on an iBlotTM 2 Regular Transfer Stack 9. 2 mini gels (head-to-head) on an iBlotTM 2 Regular Transfer Stack 10. 1 mini gel on an iBlotTM 2 Mini Transfer Stack 11. Use the Blotting Roller to remove any air bubbles between the gel and the membrane. iBlotTM 2 Dry Blotting System User Guide 31 2 Chapter 2 Protein transfer protocol Using the iBlotTM 2 Gel Transfer Device 12. Soak the iBlotTM Filter Paper (use the appropriate filter paper for the size of the gel) in a clean container of deionized water. iBlotTM Filter Paper is included with each iBlotTM 2 Transfer Stacks. Note: For E-PAGETM gels, there is no need to use a filter paper. 13. Place the presoaked iBlotTM Filter Paper on the pre-run gel. Use the Blotting Roller to remove any air bubbles between the filter paper and gel. 14. Remove and discard the white plastic separator from the Top stack. 32 iBlotTM 2 Dry Blotting System User Guide 2 Chapter 2 Protein transfer protocol Using the iBlotTM 2 Gel Transfer Device 15. Take the Top Stack from the bench and place it on top of the presoaked filter paper with the copper electrode facing up (and transfer gel layer facing down). Remove any air-bubbles using the Blotting Roller. 16. Place the iBlotTM 2 Absorbent Pad on top of the iBlotTM 2 Transfer Stack such that the electrical contacts are aligned with the corresponding electrical contacts on the blotting surface of the iBlotTM 2 Gel Transfer Device. Performing blotting 17. Use the Blotting Roller to flatten any protrusions in the transfer stack. After assembling the iBlotTM 2 Gel Transfer Stack, perform blotting as described below. Perform blotting within 1015 minutes of assembling the stacks with the gel. 1. Gently close the iBlotTM 2 Gel Transfer Device lid by pressing down with two hands on the sides of the lid. Make sure the latch is secure. Do not forcibly push the lid when closing, because it can cause the transfer stack or metal contacts to shift out of position 2. Ensure that the correct Method is selected ("Recommended running parameters" on page 23). 3. Touch the Start icon on the screen to begin the transfer. 4. At the end of the transfer, the current automatically shuts off and the iBlotTM 2 Gel Transfer Device signals the end of transfer with repeated beeping sounds, and a message on the digital display. iBlotTM 2 Dry Blotting System User Guide 33 2 Chapter 2 Protein transfer protocol Disassembling the iBlotTM 2 Transfer Stack 5. Touch the Done icon to stop the beeping. 6. Proceed to Disassembling the iBlotTM 2 Transfer Stack, "Disassembling the iBlotTM 2 Transfer Stack" on page 34. Disassembling the iBlotTM 2 Transfer Stack Introduction Procedure Refer to the instructions below to disassemble the iBlotTM 2 Transfer Stack. To obtain good transfer and detection results, open the device and disassemble the stack within 30 minutes of ending the blotting procedure. 1. Open the lid of the iBlotTM 2 Gel Transfer Device. 2. Discard the iBlotTM 2 Absorbent Pad and Top Stack. 3. Carefully remove and discard the gel and filter paper (if used) as shown below. Remove the transfer membrane from the stack and proceed with the blocking procedure or stain the membrane (see for details). Note: If you are using PVDF membranes, place the membrane immediately into water, as PVDF membranes dry quickly. If the PVDF membrane is dried, re-wet the membrane with methanol and rinse with deionized water a few times before use. Transfer the membrane to your blocking or staining solution only after you are sure that is completely wet, as reactivating after the membrane is exposed to the blocking solution may be problematic. 4. Remove and discard the plastic tray containing the Bottom stack. 34 iBlotTM 2 Dry Blotting System User Guide 2 Chapter 2 Protein transfer protocol Disassembling the iBlotTM 2 Transfer Stack 5. Wipe down instrument and metal contacts with a damp cloth or paper tissue to remove any excess liquid that may have not been absorbed by the iBlotTM 2 Absorbent Pad. 6. At this point, the iBlotTM 2 Gel Transfer Device is ready for another run (no cooling period is required). If you are not using the device, turn off the power switch located on the back of the iBlotTM 2 Gel Transfer Device. IMPORTANT! Do not reuse the iBlotTM 2 Absorbent Pad, iBlotTM Filter Paper, or Top and Bottom Stacks after blotting. Discard after each use. iBlotTM 2 Dry Blotting System User Guide 35 3 Custom methods Creating custom methods Introduction Custom methods can be created and saved on the iBlotTM 2 Gel Transfer Device for specific applications, or fine-tuning transfer conditions. Programming a custom method 1. Select New Method. 2. Select the number of steps to be included in the new Method using the (/+) buttons. Up to 10 steps can be added to each Method. 36 iBlotTM 2 Dry Blotting System User Guide 3 Chapter 3 Custom methods Creating custom methods 3. Select the voltage and time (minutes and seconds) for each step by touching the desired field and using the keyboard to enter the appropriate value. Do not exceed the recommended time limit for voltage. 4. Select Next to go to the next step and repeat the procedure as necessary. 5. Select Done after programming the final step, and the entire Method is displayed. Select Next and proceed to to "Save a Custom Method" ("Save a custom method" on page 38). Note: The Edit button can be used at this point (see "Creating custom methods from a template" on page 39, "Creating Custom Methods from a Template"), but do not select Cancel without saving the Method or you will lose all of the information. iBlotTM 2 Dry Blotting System User Guide 37 3 Chapter 3 Custom methods Creating custom methods Save a custom method 1. Select the Name field, and use the keyboard to enter a name for the new Method. 2. Save the method. 3. The new Method will appear in the list of Saved Methods. 38 iBlotTM 2 Dry Blotting System User Guide 3 Chapter 3 Custom methods Creating custom methods from a template Creating custom methods from a template Introduction Custom methods can be created and saved on the iBlotTM 2 Gel Transfer Device for specific applications, or fine-tuning transfer conditions using a pre-set template or previously saved Method as a starting point. Select a template 1. Select Templates. 2. Select a Method from the list on the Preset Templates or Saved Methods screen. iBlotTM 2 Dry Blotting System User Guide 39 3 Chapter 3 Custom methods Creating custom methods from a template 3. Select Edit from the Edit Method screen to enter Edit Mode (all voltage and time fields become enabled for editing). Change voltage/time 4. Continue to "Change voltage/time" ("Change voltage/time" on page 40), or "Add/remove steps" ("Add/remove steps" on page 41). 1. Select voltage or time fields in any given step while in Edit Mode and a keyboard will appear. 2. Enter desired values for voltage or time and select Done. 3. After editing, the Edit Method screen is shown again. 4. Select Edit to continue editing additional fields, OR 40 iBlotTM 2 Dry Blotting System User Guide 3 Chapter 3 Custom methods Creating custom methods from a template 5. Select Done when editing has been completed and proceed to to "Save a Custom Method" ("Save a custom method" on page 43). Add/remove steps 1. Select Manage Steps while in Edit Mode. iBlotTM 2 Dry Blotting System User Guide 41 3 Chapter 3 Custom methods Creating custom methods from a template 2. Select either Add Steps or Remove Steps. 3. Select the + icon located at the location where you want to insert a step, or the icon to remove a step. 4. If a step is added, a screen appears to enter the desired voltage and time for that step. After the values are added, select Done to return to the Edit Method screen. 42 iBlotTM 2 Dry Blotting System User Guide 3 Chapter 3 Custom methods Creating custom methods from a template 5. Select Done on the Edit Method screen and proceed to to "Save a Custom Method" ("Save a custom method" on page 43) Save a custom method 1. Click Save to save the method. iBlotTM 2 Dry Blotting System User Guide 43 3 Chapter 3 Custom methods Creating custom methods from a template 2. Touch the name field on the Name Display screen and use the keyboard to enter in the characters. Touch OK when done. 3. The new Method will now appear under Saved Methods icon button. 44 iBlotTM 2 Dry Blotting System User Guide A Troubleshooting Introduction Review the information below to troubleshoot your experiments using the iBlotTM 2 Gel Transfer Device and iBlotTM 2 Transfer Stacks. To troubleshoot the immunodetection process, refer to the instructions supplied by the manufacturer of the immunodetection reagents. Observation No current. Possible cause Incorrect placement of the plastic tray leading to interference with contacts. Incorrect placement of iBlotTM 2 Absorbent Pad contact. Plastic separator was not removed when assembling stack. The metal safety contacts in the lid hinge may have been dirty and did not make contact. One or more metal contacts were bent and unable to make good contact with the base unit. Pressure plate malfunction. Top Stack was placed on the device upside-down. Recommended action For Mini stacks (contact in center position), slide tray down slightly towards the front of the unit. For Regular stacks (contact on the side position) slide tray slightly towards the right. Make sure the electrical contact of the iBlotTM 2 Absorbent Pad is aligned with the corresponding electrical contacts on the blotting surface of the iBlotTM2 Gel Transfer Device. Make sure that the plastic separator is removed from the stack (see "Assembling the iBlotTM 2 Transfer Stack" on page 29). Clean the metal safety contacts in the lid hinge with a cotton swab and water.Inspect metal safety contacts, contacts may need to be replaced ((Cat. No. IB28001)) as part of routine maintenance. Do not press forcibly on lid in an attempt to engage the contacts. Excessive force can cause the contacts to shift out of position and damage the unit. Contacts may need to be replaced ((Cat. No. IB28001)) as part of routine maintenance. Ensure the pressure plate in the lid pushes up and is not bound in any way. Make sure the Top Stack is assembled with the copper electrode facing up. iBlotTM 2 Dry Blotting System User Guide 45 A Appendix A Troubleshooting Introduction Observation Difficulty closing lid. Note: Do not press forcibly on the lid as it can cause damage to the unit. No proteins transferred to the membrane. Empty spots on the membrane. High molecular weight proteins remain in the gel indicated by staining of the gel after transfer. Protein blow-through. Protein bands distorted on membrane. Possible cause Transfer stack was too thick. Recommended action The iBlotTM 2 Gel Transfer Device can only support gels of 1.5mm thickness. Ensure the proper gel is being used. Ensure that additional filter pads have not been added. Only use the supplied filter paper with the iBlotTM 2 Transfer Stacks. Ensure the stack tray is properly aligned. Do not remove the transfer stack from the plastic sample tray. No current or incorrect method used. See previous page to ensure the electrical circuit is complete and current is flowing through the device. Be sure to use the correct Method ("Recommended running parameters" on page 23). Presence of air bubbles between the gel and the membrane prevented the transfer of proteins. Expired or creased membranes were used. Be sure to remove all air bubbles between the gel and the membrane using the Blotting Roller. Use the iBlotTM 2 Transfer Stacks before the expiration date printed on the package. Incorrect method or transfer conditions used. Note: It is normal for some proteins to remain in the gel because some high molecular weight proteins do not transfer completely using the iBlotTM 2 Gel Transfer Device, compared to semi-wet transfer apparatus. Use the appropriate method and run time based on the gel type as described "Recommended running parameters" on page 23. For mini or midi gels: · Perform ethanol equilibration step as described "Optimizing blotting" on page 49 to improve transfer. · Use a Tris-acetate gel to separate the high molecular weight proteins. · Increase the transfer time in 30second increments. For E-PAGETM gels: · Increase the transfer time in 30second increments. · Use Method P3 for 8 minutes. Transfer time was too long. Reduce transfer time by 30-second increments. Note: Pre-stained markers are charged and tend to blow-through more than regular proteins. Non-uniform electric field created around wells. Ensure the gel is properly flattened using the Blotting Roller. Follow the recommendations on page 20 to obtain good results. 46 iBlotTM 2 Dry Blotting System User Guide A Appendix A Troubleshooting Introduction Observation Protein not binding/transferring to membrane (PVDF). High background. Signal intensity is similar for different protein loads after detection. Corrosion of the Top Stack. Membrane and the gel turns blue. Green discoloration of membrane edges. Bottom Stack transfer gel melts to a viscous blue solution. Possible cause Recommended action PVDF membrane was dry/partially dry. TBST buffers were used for washing. Regions where PVDF membranes are dry appear whiter than places where the membrane is wet. Remove the membrane, reactivate in 100% methanol, and rinse in water before reapplying to the transfer stack. Use PBST or WesternBreezeTM wash solutions. High protein load (detection of is not within the linear range). Since the immunodetection sensitivity is higher for dry blotting with the iBlotTM 2 Gel Transfer Device than for semi-dry or wet blotting, we recommend that you decrease the protein load, use more diluted antibody, or perform detection for shorter time. You may need to perform some optimization based on your initial results. Incorrect placement of the Top Stack. Be sure the Top Stack is placed correctly with the copper electrode facing up. Avoid placing the Top Stack in the inverted position. Longer transfer times resulted Be sure to perform the transfer for the in the deposition of copper ions. recommended time for each gel type. Copper ions carried with liquids reached the membrane. These deposits do not interfere with downstream processes. The stained regions can be cut away, but membrane washing typically results in their removal. Membrane was trimmed to fit the gel size, resulting in direct contact between the Top and Bottom Stacks. Always maintain the membrane size identical to the transfer stack. Transfer quality is not affected by smaller gel size compared to the membrane. iBlotTM 2 Dry Blotting System User Guide 47 B Post transfer analysis Post transfer analysis After the transfer, proceed to immunodetection, store the membrane for future use, or stain the membrane. · For immunodetection of proteins, use the WesternBreezeTM Chromogenic or Chemiluminescent Immunodetection Kits available at thermofisher.com (see "iBlotTM 2 Transfer Stacks" on page 57"Additional products" on page 57), or any other immunodetection kit. Note: When using the iBlotTM 2 Dry Blotting System to transfer proteins from SDS-PAGE gels, the applied field strength can result in the partial depletion of negative ions bound to the proteins. This may result in a slight decrease in the amount of protein migrating from the gel, but it also results in improved binding of the transferred proteins to the membrane. Since the membrane maintains the protein load better, higher sensitivity can be achieved for subsequent immunodetection procedures. · To store nitrocellulose membranes, air-dry the membrane and store the membrane in an air-tight plastic bag at room temperature or 4. Avoid storing nitrocellulose at temperatures below 20. Low temperatures cause the nitrocellulose to turn brittle. · To store PVDF membranes, air-dry the membrane and store the membrane in an air-tight plastic bag at room temperature, 4, or 80. When you are ready to use the membrane, re-wet the membrane with methanol for a few seconds, then rinse the membrane thoroughly with deionized water to remove methanol. · To stain membranes after blotting, use any method of staining for total protein visualization, such as CoomassieTM Blue R-250, Ponceau S, Amido Black, NovexTM Reversible Membrane Protein Stain Kit, or SYPROTM RubyTM Blot Stain ("Additional products" on page 57). The iBlotTM 2 Gel Transfer Device blotting protocol is compatible with most of the staining methods listed above. Note: The sensitivity of total protein membrane staining after blotting with the iBlotTM 2 Gel Transfer Device is slightly lower than the total membrane protein staining obtained with the semi-wet transfer protocol. However, due to the nature of dry blotting, lower transfer does not affect the immunodetection sensitivity. If you do not detect any proteins on the membrane after immunodetection or staining, refer to Troubleshooting "Introduction" on page 45. Refer to the manufacturer recommendations for optimizing immunodetection. The immunodetection profile of proteins transferred using the iBlotTM 2 Dry Blotting System may differ from what is observed when using other transfer methods, such as traditional semi-dry or wet blotting systems. It is recommended to optimize parameters such as gel protein load, primary and secondary antibody dilution, and exposure time (see "Optimizing blotting" on page 49 for details) when using the iBlotTM 2 Dry Blotting System for the first time with any new combination of antigen and detection reagents. 48 iBlotTM 2 Dry Blotting System User Guide C Optimizing blotting Optimizing blotting When using the iBlotTM 2 Gel Transfer Device, most proteins transfer efficiently using the protocol in this manual. Based on specific properties of a protein or a set of proteins, some optimization of the blotting protocol may be necessary. Optimize blotting as follows: Perform an ethanol equilibration step prior to transfer To improve the transfer of high-molecular weight proteins from mini- or midiNuPAGETM or Tris-Glycine gels, submerge the gel in 20% ethanol (prepared in deionized water), and equilibrate for 510 minutes at room temperature on a shaker prior to transfer. Do not equilibrate for longer than 10 minutes, or sensitivity may be reduced. After equilibration, perform transfer using the iBlotTM 2 Gel Transfer Device as described in this manual. Increase or decrease transfer time Based on the initial results, you can increase or decrease the transfer time for the Method used to perform the transfer (refer to Chapter 3, "Custom methods" for details on customizing a Method). Do not perform transfer for more than the recommended run time limit indicated for each Method ("Description of methods" on page 23). Proteins >150 kDa migrate more slowly, and require more time to transfer. If your protein of interest is in this size range, it may be necessary to use a Run Time of 8 10 minutes for your transfer. Small proteins <30 kDa migrate more rapidly during electrophoretic separation, and consequently require less time to transfer from the gel matrix to the membrane. If your protein of interest is in this size range, you may need to reduce the Run Time to 56 minutes for your transfer. It is normal for some proteins to remain in the gel, because some high molecular weight proteins do not transfer completely using the iBlotTM 2 Gel Transfer Device as compared to wet transfer apparatus. Since the sensitivity of detection using the iBlotTM 2 Gel Transfer Device is higher than that of semi-wet and semi-dry blotting, complete transfer of proteins is not required. Near-complete transfer of prestained standard protein bands is observed with the iBlotTM 2 Gel Transfer Device. However, note that the complete transfer of prestained protein standards does not indicate complete transfer of other proteins or blowthrough of other proteins. iBlotTM 2 Dry Blotting System User Guide 49 D Maintenance Cleaning Before cleaning the iBlotTM 2 Gel Transfer Device, make sure the device is turned off. Wipe off the blotting surface and electrodes with a damp cloth or paper tissue. Allow the parts to dry before use. General maintenance To avoid damaging the iBlotTM 2 Gel Transfer Device, do not perform any repairs or service other than general maintenance on the iBlotTM 2 Gel Transfer Device. Instructions are provided below for replacing fuses and electrical contacts. Disconnect the unit from the power supply by removing the power cord before performing either of these maintenance procedures. For any other repairs and service, contact Technical Support (). Replacing the fuse The fuses for the device are located at the rear of the device. To replace a fuse: · Make sure the device power is OFF. · Disengage the fuse holder by depressing the tabs via the release slots. · Remove the fuse holder and change the fuse (see "iBlotTM 2 Gel Transfer Device specifications" on page 55 for fuse specifications). · Replace the fuse holder (with the bottom tab down). 50 iBlotTM 2 Dry Blotting System User Guide D Appendix D Maintenance Replacing electrical contacts Replacing electrical contacts Electrical contacts should be inspected and replaced regularly as part of routine maintenance. Overtime, electrical contacts can become depressed and worn out. To ensure optimal life of the electrical contacts, wipe down the instrument and contacts with a damp cloth after each use. To replace an electrical contact, a #1 Phillips Screwdriver is required. 1. Make sure the device power is OFF, then open the lid of the iBlotTM 2 Gel Transfer Device. 2. Hold the Lid with one hand, and remove the screw holding Contact 1. Discard both the screw and the contact. 3. Remove the screw holding Contact 2. Discard both the screw and the contact. iBlotTM 2 Dry Blotting System User Guide 51 D Appendix D Maintenance Replacing electrical contacts 4. Hold the Lid with one hand, and unpeel the Round Bumper from the Lid. Discard the Round Bumper. 5. Open the bag of the Electrode Replacement Kit (Cat. no. IB28001), and remove all of the parts. 52 iBlotTM 2 Dry Blotting System User Guide D Appendix D Maintenance Replacing electrical contacts 6. Peel off the backing from the Round Bumper and place the bumper into the recess. Hold the Lid with one hand and press down on the bumper for five seconds to ensure proper adhesion. 7. Place a screw through the hole in one of the contacts. Position the contact/screw onto the Contact 1 location. Note: the contact has a small orientation notch which matches a bump in the Lid. This is to ensure proper orientation of the contact when assembled. Turn the screw with a screwdriver until it is hand-tight. iBlotTM 2 Dry Blotting System User Guide 53 D Appendix D Maintenance Replacing electrical contacts 8. Place a screw through the hole in one of the contacts. Position the contact/screw onto the Contact 2 location. Turn the screw with a screwdriver until it is handtight. 54 iBlotTM 2 Dry Blotting System User Guide E Product specifications iBlotTM 2 Gel Transfer Device specifications Dimensions: Weight: Electrical Parameters: Built-in Features: Compatibility: iBlotTM 2 Materials: Operating Temperature: Blotting Roller: Replacement Fuse: 37 cm (l) × 20 cm (w) × 11 cm (h) 2.3 kg 100240 V, 50/60 Hz, 6.3 A Digital display, alarm Suitable for transfer of mini- (8 × 8 cm), midi- (8 × 13 cm), and E-PAGETM Gels Polycarbonate, Cycoloy, Acrylic, Gold plated copper, Stainless steel, Plasticized silicone, Aluminum 540 DelrinTM roller (8.6cm wide) attached to a stainless steel handle 6.3A Slo-Blo, 5x20, 250V (Littelfuse 021806.3HXP) The iBlotTM 2 Gel Transfer Device is impervious to alcohol, acid (HCl), alkali (NaOH) but not compatible with acetone, dimethyl sulfoxide, and acetic acid. iBlotTM 2 Transfer Stack specifications Specifications for the iBlotTM 2 Transfer Stacks are listed below. For a more detailed description of the iBlotTM 2 Transfer Stacks, see "iBlotTM 2 Transfer Stacks" on page 15. Regular Top Stack Gel Layer: Mini Top Stack Gel Layer: Top Stack Gel Layer Composition: Electrode: Bottom Stack Regular Bottom Stack Gel Layer: Top Stack 13.6 cm (l) × 8.5 cm (w) × 0.19 cm (thick) 8.5 cm (l) × 8.5 cm (w) × 0.19 cm (thick) Proprietary Copper-coated mesh 14.1 cm (l) × 8.5 cm (w) × 0.32 cm (thick) iBlotTM 2 Dry Blotting System User Guide 55 E Appendix E Product specifications iBlotTM 2 Transfer Stack specifications Top Stack Mini Bottom Stack Gel Layer: 8.5 cm (l) × 8.5 cm (w) × 0.32 cm (thick) Bottom Stack Gel Layer Composition: Proprietary Electrode: Copper-coated mesh Transfer Membrane: Nitrocellulose (0.2 µm) or PVDF (0.2 µm, low fluorescence) Plastic Tray: iBlotTM 2 Absorbent Pad 16.8 cm × 10.3 cm (1.7cm wide copper contact) Dimensions: 15 cm (l) × 9.5 cm (w) × 1.1 cm (thick) Material: Gray Melamine Metal Contact: iBlotTM Filter Paper Aluminum Regular Filter Paper: 13.5 cm (l) × 8 cm (l) × 0.04 cm (thick) Mini Filter Paper: 8 cm (l) × 8 cm (w) × 0.04 cm (thick) 56 iBlotTM 2 Dry Blotting System User Guide F Accessory products iBlotTM 2 Transfer Stacks iBlotTM 2 Transfer Stacks are available at thermofisher.com. Ordering information is provided below. Product iBlotTM 2 Regular Transfer Stack, Nitrocellulose iBlotTM 2 Regular Transfer Stack, PVDF iBlotTM 2 Mini Transfer Stack, Nitrocellulose iBlotTM 2 Mini Transfer Stack, PVDF Blotting Roller Quantity 1 pack of 10 1 pack of 10 1 pack of 10 1 pack of 10 1 unit Cat. No. IB23001 IB24001 IB23002 IB24002 LC2100 Additional products Additional reagents that may be used for electrophoresis of proteins are available at thermofisher.com. Ordering information is provided below. For more information, visit thermofisher.com or call Technical Support (). Product iBindTM Flex Western Device iBindTM Flex Cards iBindTM Flex Solution Kit SuperBlockTM (PBS) Blocking Buffer SuperBlockTM T20 (PBS) Blocking Buffer SuperSignalTM West Pico PLUS Chemiluminescent Substrate Quantity 1 Device 10 Cards 1 Kit 1 L 1 L 200 mL Cat. No. SLF2000 SFL2010 SLF2020 37515 37516 34580 iBlotTM 2 Dry Blotting System User Guide 57 F Appendix F Accessory products Precast gels and premade buffers Product SuperSignalTM West Dura Extended Duration Substrate SuperSignalTM West Femto Maximum Sensitivity Substrate SeeBlueTM PLUSTM2 PreStained Standard MagicMarkTM XP Western Protein Standard NovexTM Reversible Membrane Protein Stain Kit SYPROTM RubyTM Protein Blot Stain Quantity 100 mL 100 mL 500 µL 250 µL 1 kit 200 mL Cat. No. 34075 34095 LC5925 LC5602 IB7710 S-11791 Precast gels and premade buffers A large variety of precast gels including BoltTM, NuPAGETM NovexTM, Tris-Glycine miniand midi gels, and E-PAGETM gels, as well as premade buffers are available at thermofisher.com. 58 iBlotTM 2 Dry Blotting System User Guide G Safety WARNING! GENERAL SAFETY. Using this product in a manner not specified in the user documentation may result in personal injury or damage to the instrument or device. Ensure that anyone using this product has received instructions in general safety practices for laboratories and the safety information provided in this document. · Before using an instrument or device, read and understand the safety information provided in the user documentation provided by the manufacturer of the instrument or device. · Before handling chemicals, read and understand all applicable Safety Data Sheets (SDSs) and use appropriate personal protective equipment (gloves, gowns, eye protection, and so on). To obtain SDSs, see the "Documentation and Support" section in this document. Instrument safety General CAUTION! Do not remove instrument protective covers. If you remove the protective instrument panels or disable interlock devices, you may be exposed to serious hazards including, but not limited to, severe electrical shock, laser exposure, crushing, or chemical exposure. Physical injury CAUTION! Moving Parts. Moving parts can crush, pinch and cut. Keep hands clear of moving parts while operating the instrument. Disconnect power before servicing. iBlotTM 2 Dry Blotting System User Guide 59 G Appendix G Safety Instrument safety Electrical safety WARNING! Fuse Installation. Before installing the instrument, verify that the fuses are properly installed and the fuse voltage matches the supply voltage. Replace fuses only with the type and rating specified for the unit. Improper fuses can damage the instrument wiring system and cause a fire. AVERTISSEMENT ! Installation des fusibles. Avant d'installer l'instrument, vérifier que les fusibles sont correctement insérés et que leur tension correspond à celle fournie par le circuit d'alimentation. Ne remplacer les fusibles que par des modèles du type et de la puissance spécifiés pour l'appareil. L'utilisation de fusibles inadaptés peut endommager le circuit électrique de l'instrument et provoquer un incendie. WARNING! Ensure appropriate electrical supply. For safe operation of the instrument: · Plug the system into a properly grounded receptacle with adequate current capacity. · Ensure the electrical supply is of suitable voltage. · Never operate the instrument with the ground disconnected. Grounding continuity is required for safe operation of the instrument. AVERTISSEMENT ! Veiller à utiliser une alimentation électrique appropriée. Pour garantir le fonctionnement de l'instrument en toute sécurité : · Brancher le système sur une prise électrique correctement mise à la terre et de puissance adéquate. · S'assurer que la tension électrique est convenable. · Ne jamais utiliser l'instrument alors que le dispositif de mise à la terre est déconnecté. La continuité de la mise à la terre est impérative pour le fonctionnement de l'instrument en toute sécurité. WARNING! Power Supply Line Cords. Use properly configured and approved line cords for the power supply in your facility. AVERTISSEMENT ! Cordons d'alimentation électrique. Utiliser des cordons d'alimentation adaptés et approuvés pour raccorder l'instrument au circuit électrique du site. WARNING! Disconnecting Power. To fully disconnect power either detach or unplug the power cord, positioning the instrument such that the power cord is accessible. AVERTISSEMENT ! Déconnecter l'alimentation. Pour déconnecter entièrement l'alimentation, détacher ou débrancher le cordon d'alimentation. Placer l'instrument de manière à ce que le cordon d'alimentation soit accessible. 60 iBlotTM 2 Dry Blotting System User Guide G Appendix G Safety Safety and electromagnetic compatibility (EMC) standards Cleaning and decontamination Instrument component and accessory disposal CAUTION! Cleaning and Decontamination. Use only the cleaning and decontamination methods specified in the manufacturer's user documentation. It is the responsibility of the operator (or other responsible person) to ensure the following requirements are met: · No decontamination or cleaning agents are used that could cause a HAZARD as a result of a reaction with parts of the equipment or with material contained in the equipment. · The instrument is properly decontaminated a) if hazardous material is spilled onto or into the equipment, and/or b) prior to having the instrument serviced at your facility or sending the instrument for repair, maintenance, trade-in, disposal, or termination of a loan (decontamination forms may be requested from customer service). · Before using any cleaning or decontamination methods (except those recommended by the manufacturer), users should confirm with the manufacturer that the proposed method will not damage the equipment. MISE EN GARDE ! Nettoyage et décontamination. Utiliser uniquement les méthodes de nettoyage et de décontamination indiquées dans la documentation du fabricant destinée aux utilisateurs. L'opérateur (ou toute autre personne responsable) est tenu d'assurer le respect des exigences suivantes: · Ne pas utiliser d'agents de nettoyage ou de décontamination susceptibles de réagir avec certaines parties de l'appareil ou avec les matières qu'il contient et de constituer, de ce fait, un DANGER. · L'instrument doit être correctement décontaminé a) si des substances dangereuses sont renversées sur ou à l'intérieur de l'équipement, et/ou b) avant de le faire réviser sur site ou de l'envoyer à des fins de réparation, de maintenance, de revente, d'élimination ou à l'expiration d'une période de prêt (des informations sur les formes de décontamination peuvent être demandées auprès du Service clientèle). · Avant d'utiliser une méthode de nettoyage ou de décontamination (autre que celles recommandées par le fabricant), les utilisateurs doivent vérifier auprès de celui-ci qu'elle ne risque pas d'endommager l'appareil. To minimize negative environmental impact from disposal of electronic waste, do not dispose of electronic waste in unsorted municipal waste. Follow local municipal waste ordinances for proper disposal provision and contact customer service for information about responsible disposal options. Safety and electromagnetic compatibility (EMC) standards The instrument design and manufacture complies with the following standards and requirements for safety and electromagnetic compatibility. iBlotTM 2 Dry Blotting System User Guide 61 G Appendix G Safety Safety and electromagnetic compatibility (EMC) standards Symbols on instrument The symbols used on the iBlotTM 2 Gel Transfer Device are explained below: Symbol Information The CE mark symbolizes that the product conforms to all applicable European Community provisions for which this marking is required. The iBlotTM 2 Gel Transfer Device complies with the TUV Rhineland North America Inc. safety requirements. The indicators "C" and "US" means that the product is certified for both the U.S. and Canadian markets, to the applicable U.S. and Canadian standards. The Caution symbol denotes a risk of safety hazard. Refer to accompanying documentation to avoid possible personal injury or instrument damage. The WEEE (Waste Electrical and Electronic Equipment) symbol indicates that this product should not be disposed of in unsorted municipal waste. Follow local municipal waste ordinances for proper disposal provisions to reduce the environmental impact of WEEE. Visit http://www.lifetechnologies.com/weee for collection and recycling options. The Electrical Warning symbol denotes a risk of electrical shock hazards. To avoid risk of injury from electric shock, do not open enclosures marked with this symbol. The Caution symbol denotes a risk of safety hazard. Refer to accompanying documentation to avoid possible personal injury or instrument damage. Product catalog number. Consult instructions for use. Site of manufacture. Safety standards Reference EN-61010-1:2010 (3rd Edition) Description Safety Requirements for Electrical Equipment for Measurement, Control, and Laboratory Use Part 1: General Requirements EMC Reference Directive 2004/108/EC EN 61326-1 FCC Part 18 (47 CFR) Description European Union "EMC Directive" Electrical Equipment for Measurement, Control and Laboratory Use EMC Requirements Part 1: General Requirements U.S. Standard "Industrial, Scientific, and Medical Equipment" 62 iBlotTM 2 Dry Blotting System User Guide G Appendix G Safety Safety and electromagnetic compatibility (EMC) standards Reference AS/NZS 2064 ICES-001, Issue 3 FCC Part 15 Subpart B (47 CFR) Description Limits and Methods of Measurement of Electromagnetic Disturbance Characteristics of Industrial, Scientific, and Medical (ISM) Radiofrequency Equipment Industrial, Scientific and Medical (ISM) Radio Frequency Generators U.S. Standard Radio Frequency Devices Environmental design standards Reference Directive 2012/19/EU Directive 2011/65/EU SJ/T 11364-2014 Description European Union "WEEE Directive"--Waste electrical and electronic equipment European Union "RoHS Directive"--Restriction of hazardous substances in electrical and electronic equipment "China RoHS" Standard--Marking for the Restricted Use of Hazardous Substances in Electronic and Electrical Products For instrument specific certificates, visit our customer resource page at www.thermofisher.com/us/en/home/technical-resources/rohs-certificates.html. iBlotTM 2 Dry Blotting System User Guide 63 G Appendix G Safety Chemical safety Chemical safety WARNING! GENERAL CHEMICAL HANDLING. To minimize hazards, ensure laboratory personnel read and practice the general safety guidelines for chemical usage, storage, and waste provided below. Consult the relevant SDS for specific precautions and instructions: · Read and understand the Safety Data Sheets (SDSs) provided by the chemical manufacturer before you store, handle, or work with any chemicals or hazardous materials. To obtain SDSs, see the "Documentation and Support" section in this document. · Minimize contact with chemicals. Wear appropriate personal protective equipment when handling chemicals (for example, safety glasses, gloves, or protective clothing). · Minimize the inhalation of chemicals. Do not leave chemical containers open. Use only with adequate ventilation (for example, fume hood). · Check regularly for chemical leaks or spills. If a leak or spill occurs, follow the manufacturer's cleanup procedures as recommended in the SDS. · Handle chemical wastes in a fume hood. · Ensure use of primary and secondary waste containers. (A primary waste container holds the immediate waste. A secondary container contains spills or leaks from the primary container. Both containers must be compatible with the waste material and meet federal, state, and local requirements for container storage.) · After emptying a waste container, seal it with the cap provided. · Characterize (by analysis if necessary) the waste generated by the particular applications, reagents, and substrates used in your laboratory. · Ensure that the waste is stored, transferred, transported, and disposed of according to all local, state/provincial, and/or national regulations. · IMPORTANT! Radioactive or biohazardous materials may require special handling, and disposal limitations may apply. AVERTISSEMENT ! PRÉCAUTIONS GÉNÉRALES EN CAS DE MANIPULATION DE PRODUITS CHIMIQUES. Pour minimiser les risques, veiller à ce que le personnel du laboratoire lise attentivement et mette en oeuvre les consignes de sécurité générales relatives à l'utilisation et au stockage des produits chimiques et à la gestion des déchets qui en découlent, décrites cidessous. Consulter également la FDS appropriée pour connaître les précautions et instructions particulières à respecter : · Lire et comprendre les fiches de données de sécurité (FDS) fournies par le fabricant avant de stocker, de manipuler ou d'utiliser les matériaux dangereux ou les produits chimiques. Pour obtenir les FDS, se reporter à la section « Documentation et support » du présent document. · Limiter les contacts avec les produits chimiques. Porter des équipements de protection appropriés lors de la manipulation des produits chimiques (par exemple : lunettes de sûreté, gants ou vêtements de protection). · Limiter l'inhalation des produits chimiques. Ne pas laisser les récipients de produits chimiques ouverts. Ils ne doivent être utilisés qu'avec une ventilation adéquate (par exemple, sorbonne). 64 iBlotTM 2 Dry Blotting System User Guide G Appendix G Safety Biological hazard safety · Vérifier régulièrement l'absence de fuite ou d'écoulement des produits chimiques. En cas de fuite ou d'écoulement d'un produit, respecter les directives de nettoyage du fabricant recommandées dans la FDS. · Manipuler les déchets chimiques dans une sorbonne. · Veiller à utiliser des récipients à déchets primaire et secondaire. (Le récipient primaire contient les déchets immédiats, le récipient secondaire contient les fuites et les écoulements du récipient primaire. Les deux récipients doivent être compatibles avec les matériaux mis au rebut et conformes aux exigences locales, nationales et communautaires en matière de confinement des récipients.) · Une fois le récipient à déchets vidé, il doit être refermé hermétiquement avec le couvercle fourni. · Caractériser (par une analyse si nécessaire) les déchets générés par les applications, les réactifs et les substrats particuliers utilisés dans le laboratoire. · Vérifier que les déchets sont convenablement stockés, transférés, transportés et éliminés en respectant toutes les réglementations locales, nationales et/ou communautaires en vigueur. · IMPORTANT ! Les matériaux représentant un danger biologique ou radioactif exigent parfois une manipulation spéciale, et des limitations peuvent s'appliquer à leur élimination. Biological hazard safety WARNING! BIOHAZARD. Biological samples such as tissues, body fluids, infectious agents, and blood of humans and other animals have the potential to transmit infectious diseases. Conduct all work in properly equipped facilities with the appropriate safety equipment (for example, physical containment devices). Safety equipment can also include items for personal protection, such as gloves, coats, gowns, shoe covers, boots, respirators, face shields, safety glasses, or goggles. Individuals should be trained according to applicable regulatory and company/ institution requirements before working with potentially biohazardous materials. Follow all applicable local, state/provincial, and/or national regulations. The following references provide general guidelines when handling biological samples in laboratory environment. · U.S. Department of Health and Human Services, Biosafety in Microbiological and Biomedical Laboratories (BMBL), 5th Edition, HHS Publication No. (CDC) 21-1112, Revised December 2009; found at: https://www.cdc.gov/labs/pdf/ CDC-BiosafetymicrobiologicalBiomedicalLaboratories-2009-P.pdf · World Health Organization, Laboratory Biosafety Manual, 3rd Edition, WHO/CDS/CSR/LYO/2004.11; found at: www.who.int/csr/resources/publications/biosafety/Biosafety7.pdf iBlotTM 2 Dry Blotting System User Guide 65 H Documentation and support Customer and technical support Visit thermofisher.com/support for the latest service and support information. · Worldwide contact telephone numbers · Product support information Product FAQs Software, patches, and updates Training for many applications and instruments · Order and web support · Product documentation User guides, manuals, and protocols Certificates of Analysis Safety Data Sheets (SDSs; also known as MSDSs) Note: For SDSs for reagents and chemicals from other manufacturers, contact the manufacturer. Limited product warranty Life Technologies Corporation and/or its affiliate(s) warrant their products as set forth in the Life Technologies' General Terms and Conditions of Sale at www.thermofisher.com/us/en/home/global/terms-and-conditions.html. If you have any questions, please contact Life Technologies at www.thermofisher.com/support. 66 iBlotTM 2 Dry Blotting System User Guide thermofisher.com/support | thermofisher.com/askaquestion thermofisher.com 19 February 2019Antenna House PDF Output Library 6.5.1119 (Windows (x64))